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May 19th
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Home Basic Tech Methods to determine the size of an object in microns

Methods to determine the size of an object in microns

Mathematically

Th number of pixels the image of a cell takes on the CCD camera depends on:

1. the magnification used, and on

2. the physical size of the pixels on the CCD camera (in our case, it is 6.45um)

In order to relate the size of a cell in pixels to its size in um, use the following formula:

Cell size (per pixel) = Physical length of a pixel on the CCD / total magnification


The physical length of a pixel on our CCD is 6.45um. So for the following magnification, this formula gives us:

l 100x : 0.0645 um/pixel or 15.50 pixels/um

l 90x  : 0.0717 um/pixel or 13.95 pixels/um

l 60x  : 0.1075 um/pixel or 9.30 pixels/um

l 40x  : 0.1613 um/pixel or 6.21 pixels/um

l 20x  : 0.3225 um/pixel or 3.10 pixels/um

l 10x  : 0.645 um/pixel or 1.55 pixel/um


Important notes:

l We assumed here that the magnifier is at position 1x (not 1.5x). If it is at 1.5x, total magnification must be multiplied by 1.5.

l We assumed here that the bin size is 1x1. If it is, say, 2x2, the size of a pixel will be double.

l 90x corresponds to 60x objective with 1.5x intermediate magnification