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Specific protocols
Endy:DNA ligation using T4 DNA ligase -- Using T4 DNA Ligase
Knight:DNA ligation using NEB Quick Ligation Kit -- 5min ligation.
Knight:TOPO TA cloning -- For PCR products.
Silver:Ligation -- A protocol for sticky end ligations using the Roche Kit.
BE.109:DNA ligation -- A ligation protocol for classroom use in a laboratory class taught at MIT. Uses T4 DNA ligase but has interesting tips and tricks.
DNA Ligation Protocol (Revised from Takara Shuzo Co., Ltd.)
DNA ligation (Oxford Practical Approach Serials)
DNA Insert Ligation into Vector DNA (Fermantas)