Microarray Protocols
 
Basic knowledge of microarray.
 
Basic knowledge of microarray 2.
 
Introduction to Microarray.
 
A Mediabook of Microarrays
 
Protein chips 
 
MicroArray Procedure

 

(Modified by Ryoji Kojima, Takumi Yoshida and Jeffrey Randall, 8.20.2000)

 

1. Total RNA Isolation from cultured cells.

 

2. DNase Treatment of Total RNA 

 

3. Making the single strand cDNA probe.

 

4. Automated Slide Processor (ASP) Version for hybridization.

 

5. Washing microarrays in ASP.

 

6.Processing of Array slide

 

7. Pre-hybridization of the processed slides (NON-Automated version).

 

8. Hybridization of Cy3 + Cy5 probe to glass array (NON-Automated version).

 

9. Preparation of Dendrimer Cy3 and Cy5.

 

10. Washing unbound probe from glass array (NON-Automated version).

 

11. Hybridization of Dendrimers (Cy3 and Cy5) to Array (NON-Automated version).

 

12.Washing unbound dendrimer from glass array(NON-Automated version).

 

Microarray Dababases

 

Troubleshooting

 

Other Microarray Protocols (1)

 

Other Microarray Protocols (2)
 
Other Microarray Protocols (3)
 
                                                                                            
 
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Protocols / Molecular Biology

DNA isolation & related protocols  

DNA Purification (glass milk vs electroelution)
DNA and RNA sequencing
Nucleic acid methods (1)
Nucleic acid methods (2)
Isolation of DNA,RNA, and Protein simultaneously.
DNA mutation detection by SSCP 
Mouse genotyping by PCR
PCR,RT-PCR,Real time PCR etc.
Southern blot hybridization
Loss of Heterozygosity (LOH) 
Gene knockout protocol 
RNA Isolation and Purification 
Preparation of DNA and RNA probes
Northern blot hybridization  
SiRNA gene knockout
Western blot hybridization
Molecular cloning 
DNA protein interactions
Conditional gene transfection(Tet on/off)
Protein sequencing
Protein labeling techniques  
Subcellular fractionations  
Plasmid and its usefulness
DNA library construction
Microarray protocols.
Protein chips 

Methods for detecting protein phosphorylation

Protein methods
Molecular separation
Gene therapy for cancer
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