Molecular Cloning
 
PCR Based Molecular Cloning
 
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RNA and MicroRNA Cloning
 
Protocols for recombinant DNA isolation,cloning,and sequencing.
 
 

E. coli Transformation for Subcloning


1. Thaw 50 uL frozen competent cells (AG1, Stratagene #200232) per transformation on ice.

2. Transfer the cells to a pre-chilled Falcon 2059 (round-bottom with cap) tube, and add
0.85 uL 2-mercaptoethanol which is provided with the competent cells.

3. Swirl the tube gently for every 2 min while incubating the cells on ice for 10 min.

4. Add an appropriate amount of DNA (1-50 ng) to the competent cells, and incubate on ice
for 30 min without disturbing.

5. Heat shock for 45 sec at 42 C and incubate on ice for 2 min.

6. Add 450 uL pre-warmed (42 C) SOC medium (GibcoBRL), and incubate at 37 C with
vigorous shaking.

7. Plate the cells on 3 same plates (e.g. 50, 150, 300 uL) with glass spreader.

8. Incubate overnight at 37 C.

 
 
 
 
 
 
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Protocols / Molecular Biology

DNA isolation & related protocols  

DNA Purification (glass milk vs electroelution)
DNA and RNA sequencing
Nucleic acid methods (1)
Nucleic acid methods (2)
Isolation of DNA,RNA, and Protein simultaneously.
DNA mutation detection by SSCP 
Mouse genotyping by PCR
PCR,RT-PCR,Real time PCR etc.
Southern blot hybridization
Loss of Heterozygosity (LOH) 
Gene knockout protocol 
RNA Isolation and Purification 
Preparation of DNA and RNA probes
Northern blot hybridization  
SiRNA gene knockout
Western blot hybridization
Molecular cloning 
DNA protein interactions
Conditional gene transfection(Tet on/off)
Protein sequencing
Protein labeling techniques  
Subcellular fractionations  
Plasmid and its usefulness
DNA library construction
Microarray protocols.
Protein chips 

Methods for detecting protein phosphorylation

Protein methods
Molecular separation
Gene therapy for cancer
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