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Home RNA RNA MicroArray Protocol

RNA MicroArray Protocol

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1. Total RNA Isolation from cultured cells.

 
1. Wash cultured cells 2X with 8 ml PBS (without calcium, without magnesium) at RT.(For 100 mm dish use 5 ml PBS)

2. Add 8 ml TRIzol reagent (Gibco/BRL) to cells in T-75 flask.

(For 100 mm dish use 5 ml TRIzol reagent.)

3. Transfer lysed cell solution to a 15 ml flacon tube.

4. Incubate at RT for 5 minutes.

5. Add 1.6 ml Chloroform:Iso-Amyl alcohol (24:1) to each tube.

 

6. Shake vigorously for 30 seconds.

7. Incubate at RT for 3 minutes.

8. Spin in centrifuge at 4oC for 15 minutes at 4000 RPM.

9. Transfer upper phase (clear solution only; no white goop) to a new 15 ml tube.

10. Add 4 ml of Isopropanol (2-propanol) to each tube.

11. Mix by inverting several times.

12. Incubate at RT for 10 minutes.

13. Spin for 30 minutes at 4oC at 4000 RPM.

14. Remove supernatant with a pipette very carefully.

15. Resuspend pelleted RNA using pipette in 1 ml of 70 % Ethanol.

16. Transfer to a microfuge tube.

17. Spin for 10 minutes at 4oC at 14,000 RPM.

18. Remove supernatant with a pipette.

19. Aspirate remaining drops.

20. Air-dry pellet for 5-10 minutes at RT.

21. Resuspend RNA pellet in 80 ul DEPC treated water.

22. Spec 2 ul in 198 ul of water.

23. Store RNA at -80oC.

Jeffrey D. Randall, Takumi Yoshida, Ryoji Kojima, Steven Gullans © Page 2 9/6/2001

Jeffrey D. Randall, Takumi Yoshida, Ryoji Kojima, Steven Gullans © Page 2 9/6/2001

 



Last Updated ( Thursday, 18 September 2008 03:20 )